Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015857571.1_cds_XP_016513470.1_26011
CDS Infomation

[gene=LOC107830439] [db_xref=GeneID:107830439] [protein=crossover junction endonuclease MUS81-like] [protein_id=XP_016513470.1] [location=join(41910..42103,42330..42430,42986..43064,43146..43232,43342..43464,44938..45199,47011..47143,47296..47429,47578..47717,49338..49395,49920..50078,50965..51044,51142..51373,51798..51884,52447..52551)] [gbkey=CDS]
Sequence

ATGGAGTACCAAAAGAAGGTGGTATGCCCGGAGAACGAAGAGTTGGCAGCGTACATGTGG
AACAAGAAGCAAGAAATGGCTGAAAACCCCAAAGGGATTTCGGATAATATCTTAAAAACT
CTTCACAAAGCCTATACCAATCTCTGCAATTCCAAGACCCCTATTAAGACTCTCAAAGAG
TTTTCTGAGATCAAGGGTGTTGGAAAATGGATTTTGAGGCAAATGAAAGGTTTTTTTGAA
GCTGATGATCCTGGTGCTTCATCATCCGAGGAGAGTGATAACTCCGGTGAGAAAGGGAAG
AGAAATAAGGGAACAAAGCGTTACATGCCTCAAAAGAATTCTGTGGCCTATGCCTTACTG
ATCACACTGTACAGGTGTACAACAAACGGTGAAAAATTTATGCATAAGCAGGAGCTTATT
GATGCTACTGAAGCTAGTGGTCTTTCTCGTGCACCTGTTGGACCTGAGAAAGGAAAAGGA
AAAGCTGGACAATTTGGCTCGCCAAGGGACTGGTACAGCGGATGGAGCTGCATGGGGAAG
TTAATAGACAAAGGACTTGTTGCTAAGTCTAGCTGCCCTGCAAAATATATGCTCACTGAA
GCAGGCAAAGAGATTGCACGGGAATGTCTTTTGAGGTCAGGAATTGTTGATTCCAAAGAA
ATATCGGCATCTTTGACAGGATTTTCAGATTTGGATCAAAATGACAAGCTAGATAAGACT
TTGTCAACTATTAACTTATCAAGTACCGAAGTTCGACATACTACTTCAGTGAGAAAAAGG
CCAGTGCCATCATCTCAATCGACTGGCAAAAAGAAAATGAACATTCCATCTGAATCTCTT
GACAGGTTTATTCGAATGGGCTTCTCCAAGGAACAAGTAATTCGGGCTTACTCTGAAGTG
TTAGAAACATCACAGAGCAAAGATATATCATTAATCTGGCCGTCTGTTCTGTGTCGCCTT
CGCGAAGATCAAGTTTATGGTCAAGTTGGTACCTGTAGAATTGATGATAGACTATCCGAG
ACTACTTGCAATGGAACAGTAAATAGTGCAAAGCCTTCTCATCTTGCTGATTTTGCAGAT
TGTTCGAATACTTTGAGAGCTTGTTCATCCAATCTAGTTGATGAGCAATTACCATGTCTG
GAAACTAGATCCAATCTCTTGGTGGCGCCGCCATTGGCCTATGGAGAGCAATTTGAAGAT
GTTTATGAAGTAGTTTTGGTATTAGATGATCGGGAACAGTTTACTTCTCGAGGGTCGCGT
TCCAGGAAGATAATTGAAAACATCAGCACGCAATTTAAAATTGAAATAGAGGTTAGGCGC
TTGCCTGTTGGTGATGCAATCTGGATAGCTCGTAACAAAGTTATTGGCACTGAATACGTT
CTTGACTTTATTGTGGAGAGGAAGAATGTTGAAGATTTGCAAAGTTCAATCAGGGATAAC
CGATATAGAGATCAGAAGCTGCGGATTTTGAGGTGTGGACTCAAGAAGATGATGTATGTC
GTTGAAGGAGATCCAAATTCTTGTACTGCTGCCGATAGCATCAAAACAGCTTGTTTCACA
ACCGAGATCTTGGAGGGCTTTGATGTGCTAAGAACAAGTGGTTTGGGAGAGACATTGAGA
AAGTACGGCTGTCTTACTCAAGCAATCAATCAGTACTACAAATGCATGGATAACAAGCGG
TCCAATACCAGGCTGTGCCCCTGCTTTAATGAGTTTATTAGGAGGTGTGAGGATCTCGAT
AAAATGACAGTAAGCGATGTGTTTGCCACCCAACTCATGCAGGTCCCACAAGTGACAGAG
GAAGTTGCTATTGCTGTTCTTGATATGTATCCAACACTTTCATCTCTTGCGCGTGCTTAC
TCGTTGCTTGATGGCGATGTTCGTGCGCAAGAGGAAATGCTCAAGGAGCAGAGCAACAAC
TTAGTCAATGCAACTGCTAGCAAAAAGATTTTCGAGTTGATTTGGAGCAATTGA

Peptide Sequence

PEP ID

XP_016513470.1
PEP Infomation

PREDICTED: crossover junction endonuclease MUS81-like [Nicotiana tabacum]
Sequence

MEYQKKVVCPENEELAAYMWNKKQEMAENPKGISDNILKTLHKAYTNLCNSKTPIKTLKE
FSEIKGVGKWILRQMKGFFEADDPGASSSEESDNSGEKGKRNKGTKRYMPQKNSVAYALL
ITLYRCTTNGEKFMHKQELIDATEASGLSRAPVGPEKGKGKAGQFGSPRDWYSGWSCMGK
LIDKGLVAKSSCPAKYMLTEAGKEIARECLLRSGIVDSKEISASLTGFSDLDQNDKLDKT
LSTINLSSTEVRHTTSVRKRPVPSSQSTGKKKMNIPSESLDRFIRMGFSKEQVIRAYSEV
LETSQSKDISLIWPSVLCRLREDQVYGQVGTCRIDDRLSETTCNGTVNSAKPSHLADFAD
CSNTLRACSSNLVDEQLPCLETRSNLLVAPPLAYGEQFEDVYEVVLVLDDREQFTSRGSR
SRKIIENISTQFKIEIEVRRLPVGDAIWIARNKVIGTEYVLDFIVERKNVEDLQSSIRDN
RYRDQKLRILRCGLKKMMYVVEGDPNSCTAADSIKTACFTTEILEGFDVLRTSGLGETLR
KYGCLTQAINQYYKCMDNKRSNTRLCPCFNEFIRRCEDLDKMTVSDVFATQLMQVPQVTE
EVAIAVLDMYPTLSSLARAYSLLDGDVRAQEEMLKEQSNNLVNATASKKIFELIWSN

Transcript Sequence

Gene sequence data has not been registered.